Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MQYALLFPGQGSQCIGMGKSFYESHTLAKELFERASNVLKVDMKK-TLFEENELLKESAYTQPAIYLVSYIAYQLLNKQANGGLKPVFALGHSLGEVSAVSLSGALDFEKALKLTHQRGKMMQEACANKDASMMVVLGVSEESLLSLCQRTKN---VWCANFNGGMQVVLAGVKDDLKALEPTLKEMGAKRVVFLEMSVASHCPFLEPMIFKFQELLEKSLKDKFHFEIISNATNEAYHNKSKAVELLSLQLTQPVRYQDCVKSNNDR-VDVFFELGCGSVLKGLNKRLSNKPTISVGDNKGLDEAIEFLEEYV |
| 2G2O Chain:A ((2-294)) | -QFAFVFPGQGSQTVGMLADMAASYPIVEETFAEASAALGYDLWALTQQGPAEELNKTWQTQPALLTASVALYRVWQQQ--GGKAPAMMAGHSLGEYSALVCAGVIDFADAVRLVEMRGKFMQEAVPEGTGAMAAIIGLDDASIAKACEEAAEGQVVSPVNFNSPGQVVIAGHKEAVERAGAACKAAGAKRALPLPVSVPSHCALMKPAADKLAVELAKITFNAPTVPVVNNVDVKCETNGDAIRDALVRQLYNPVQWTKSVEYMAAQGVEHLYEVGPGKVLTGLTKRIVDTLTASALNEPSAMAAALEL---- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2G2O.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -158365 for 2595 contacts (-61.0/contact) +
2D Compatibility (PS) -30897 + (NN) -10589 + (LL) 136
1D Compatibility (HY) -11600 + (ID) 5000
Total energy: -216315.0 ( -83.36 by residue)
QMean score : 0.555
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