Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MPKPKKNTLPCSLSVKMSYFMRLLIKWRTRSLSHKMMTLVQILSILALASKASEDLEEQLKKIKDYIYKTLNAKIASDVYDRVLILVNEYCANEELF--------DKESVKISDLLIQDIQ----LYALVDEMLKEDKYQVQHTILKGIIKRKYDEAYSLNSEDRILLEYQ------ERLLEPSYASFSNKKFK |
| 4MIF Chain:A ((161-255)) | ------------------------------------------------------------------------------------------CATPEFFAPADFNAPHRERPKLSTDAAEDARIWKDLYAQAKEIIGTSTTEFDHSIRHNLVLRKYNDIF---QKENVIREFSPLPLACHRLTDPDYVEWHATDRI |
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General information:
TITO was launched using:
| RESULT:
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Template: 4MIF.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 12923 for 335 contacts (38.6/contact) +
2D Compatibility (PS) -7956 + (NN) 1079 + (LL) 8344
1D Compatibility (HY) -3600 + (ID) 1100
Total energy: 9690.0 ( 28.93 by residue)
QMean score : 0.178
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