Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MLIHICCSVDNLYFLKKAKEAFAGEKIVGFFYNPNIHPYSEYLLRLEDVKRTCEMLGI-ELLEGDYEL-EKFLDKA-KG-------KELLGEKSERCFECFDLRLEA-SALKAFELGEEKFTTTLLTSPKKDPNQLIAKGQHIAQRHNLEFVVFRNDNFEHFKSELDLNLQALARENELYRQNYCGCQFALKIQKESQNRSPFELYSPLKRQILPASIEERTQVFRELDAAKKDANKPFLAQKTIATYRLLNGGVWLSKNSNPLDCCILARSKSKAKVRINDLRWVFSQRLSALVGYSQRDETLFLTLEGLNTLMAKNYDNLKELNLNPLSYEEELSLRALVSGSESINPIIVLEERTEKTLFVEIKSIFQEEKVFYLL |
| 2PG3 Chain:A ((9-122)) | ----FSGGQDSTTCLIQALQD--YDDVHCITFDYGQRHRAE----IEVAQELSQKLGAAAHKVLDVGLLNELATSSLTRDSIPVPD--------NTFVPGRNILFLTLASIYAYQVGAEAVITGVCETDFSGYPDCRDEFVKALNQAIVLGIARDIRFETPLMWLNKAETWALADYYQQLDTVRYHTLTCYNGIKGDGCGQCAACHLRANGLAQYQKDAATVMASLKQKVGL--------------------------------------------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2PG3.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -35169 for 583 contacts (-60.3/contact) +
2D Compatibility (PS) -10035 + (NN) -4731 + (LL) 12300
1D Compatibility (HY) -400 + (ID) 650
Total energy: -38685.0 ( -66.36 by residue)
QMean score : 0.515
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