Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MKKLILAVFFTLTLSVSA----KEVKIVFLETSDIHGRLFSYDYAVGEQKPNNGLTRIATLIKKQRAENKNVVLIDSGDLLQGNSAELFNDEPIHPLVRAENDLKFDIRVLGNHEFNFSKDFLEKNIKGFNGDVVNANIIKIADNKPFVKPYIIKKIDGVRVAVVGFLVPHVPTWEASTPEHFAGLEFLDAEEALKKTLSELKG--KYDILIGAFHLGRED--EKGGD--GIPDLAKKFP--QFDIIFAGHEH-----AVYNTK--------------VGKVHTIEPGAYGAYLAKGVVVFDTKTKKKIITTENLPTKDAPEDEELAKKYEYVDKKSKE--YANEVVGEVTKTFIDRPDFITGEEKITT------------MPTAALQETPVIELINKVQKYYAKADVSAAALFNFGANLKKGPFKRKDVAYIYKFANTLIGVRITGENLLKYMEWSYKFYNQLQPGDLTISFNENVRGYNFDMFSGVKYQVDVTKPAGQRIINPTINGKPINPKAVYKLAINNYRFGTLSTTLKLVTDADRYYDSYDALQDNGQIRDLIIKYITEEKNAKVTPELEHNWEIINYDFKNPLLEKLAEKLKEGSVKIPTSKDGRTLNVKSIKESEVE |
2USH Chain:A ((26-498)) | ------------------YEQDKTYKITVLHTNDHHGHFWRNEY--GEYGLAAQKTLVDGIRKEVAAEGGSVLLLSGGDINTGVPESDLQD--AEPDFRGMNLVGYDAMAIGNHEFDNPLTVLRQQEKWAKFPLLSANIYQKSTGERLFKPWALFKRQDLKIAVIGLTTDD--TAK-----YFTDIEFRKPADEAKLVIQELQQTEKPDIIIAATHMGHYDNGEHGSNAPGDVEMARALPAGSLAMIVGGHSQDPVCMAAENKKQVDYVPGTPCKPDQQNGIWIVQAHEWGKYVGRADFEF-RNGEMKMVNYQLIPVN-------LKKKV------SERVLYTPEIAENQQMISLLSPFQNKGKAQLEVKIGETNGRLEGDRDKVRFVQTNMGRLILAAQMDRTGADFAVMSGGGIRDSIEAGDISYKNVLKVQPFGNVVVYADMTGKEVIDYL----TAVAQMKPDSGA-----------YPQFANVSF---VAK---------KIKGEPVDPAKTYRMATLNFNATGGDGYPRLDNKPGYVNTGFIDAEVLKAYIQKSSPLDVSVYEPKGEVSW-------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2USH.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -131413 for 3372 contacts (-39.0/contact) +
2D Compatibility (PS) -44203 + (NN) -11519 + (LL) 7700
1D Compatibility (HY) -18400 + (ID) 5350
Total energy: -203185.0 ( -60.26 by residue)
QMean score : 0.493
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