Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKVNFFATCLGAAIYSNASLNAIKLLRKENLEVVFKKDQTCCGQPSYNSGYYEETKKVVLYNIKLYSNNDYPIILPSGSCTGMMRHDYLELFEGHAEFNMVKDFCSRVYELSEFLDKKLQVKYEDKGEPLKITWHSNCHALRVAKVIDSAKNLIRQLKNVELIELEKEEECCGFGGTFSVKEPEISAVMVKEKIKDIESRHVDVIVSADAGCLMNISTAMQKMGSLTKPMHFYDFLASRLGL |
| 4H2F Chain:A ((474-532)) | ---------------------------------------TACAVPSYDPLKMDEVYKVILPNFLANGGDGFQMIKDE-----LLRHD-----SGDQDINVVSTYISKMKVIYPAVEGRIKFS------------------------------------------------------------------------------------------------------------------------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 4H2F.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -8727 for 238 contacts (-36.7/contact) +
2D Compatibility (PS) -5960 + (NN) -1122 + (LL) 13496
1D Compatibility (HY) -4800 + (ID) 900
Total energy: -8013.0 ( -33.67 by residue)
QMean score : 0.036
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