Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | METLHNALLKWYEEFGRKDLPFRNLKGINAPYEVYISEVMSQQTQISTVIERFYPPFLKAFPTLKDLANAPLEEVLLLWRGLGYYSRAKNLKKSAEICVKEHHSQLPNDYQSLLKLPGIGAYTANAILCFGFREKSACVDANVKRVLLRLFGLDPNIHAKDLQIKANDFLNLNESFN-------HNQALIDLGALICS-PKPKCAICPFNPYCLGKNHLERHTLKKKQEIIQEERYLGVVIQNNQIALEKIEQKLYLGMHHFPNLKENLEFKLPFLGTIKHSHTKFKLNLNLYLATTKDLKNPIRFYSLKDLETLPISSMTLKILNFLKQKNLFGG |
1KG4 Chain:A ((10-210)) | -------VLDWYDKYGRKTLPWQIDK---TPYKVWLSEVMLQQTQVATVIP-YFERFMARFPTVTDLANAPLDEVLHLWTGLGYYARARNLHKAAQQVATLHGGKFPETFEEVAALPGVGRSTAGAILSLSLGKHFPILDGNVARVLARCYAVSGWPGKKEVE---NKLWSLSEQVTPAVGVERFNQAMMDLGAMICTRSKPKCSLCPLQNGCIAAANNSWALYPGKKP----------------------------------------------------------------------------------------------------------- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 1KG4.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -121011 for 1462 contacts (-82.8/contact) +
2D Compatibility (PS) -20657 + (NN) -14350 + (LL) 9584
1D Compatibility (HY) -22800 + (ID) 4400
Total energy: -173634.0 ( -118.76 by residue)
QMean score : 0.492
|
|
|