Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MDLESLRGFAYAFFTILFTLFLYAYIFSMYRKQKKGIVDYERYGYLALNDALEDELIEPRHKEVHDKGIKES
2JSH Chain:A ((12-22))
-----------------------------------SGAQYQQHGRAL-------------------------
General information:
TITO was launched using:
RESULT:
Template:
2JSH.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -2424 for 37 contacts (-65.5/contact) +
2D Compatibility (PS) -1107 + (NN) 320 + (LL) 5408
1D Compatibility (HY) 1600 + (ID) 100
Total energy: 3697.0 ( 99.92 by residue)
QMean score : 0.333
(partial model without unconserved sides chains):
PDB file :
Tito_2JSH.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2JSH-query.scw
PDB file :
Tito_Scwrl_2JSH.pdb
: