Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKFLNGLAGNLLIVVILLCVVVFFALKAIHIQKEQATNYYRYKDINALEAKNTQNHANYELVNQGSKK
2M20 Chain:A ((5-21))
------IATGLVGALLLLLVVALGIGLFIRRRHIVRKRTLRRLLQERELVEPLTPSGEKLWS------
General information:
TITO was launched using:
RESULT:
Template:
2M20.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -12572 for 63 contacts (-199.6/contact) +
2D Compatibility (PS) -1634 + (NN) -686 + (LL) 1192
1D Compatibility (HY) -3200 + (ID) 300
Total energy: -17200.0 ( -273.02 by residue)
QMean score : 0.694
(partial model without unconserved sides chains):
PDB file :
Tito_2M20.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2M20-query.scw
PDB file :
Tito_Scwrl_2M20.pdb
: