Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKKNILNLALVGALSASFLMAKPAHNANNSTHNTKETTDASAGVLATVDGRPITKSDFDMIKQRNPNFDFDKLKEKEKEALIEQAIRTALVENEAKAEKLNQTPEFKAMMEAVKKQALVEFWAKKQAEEVKKIQIPEKEMQDFYNANKDQLFVKQEAHARHILVK-----TEDEAKRIISEIDKQPKAKKEAKFIELANRDTIDPNSKNAQNGGDLGKFQKNQMAPDFSKAAFALTPGDYTKTPVKTEFGYHIIYLISKDSPVTYTYEQAKPTIKGMLQEKLFQERMNQRIEELRKHAKIVINK |
| 1M5Y Chain:A ((284-425)) | -----------------------------------------------------------------------------------------------------------------------------------------------------------EVHARHILLKPSPIMTDEQARVKLEQIAADIKSGK-TTFAAAAKEFSQDPGSAN--QGGDLGWATPDIFDPAFRDALTRLNKGQMS-APVHSSFGWHLIELLDTRN-VD--------RAYRMLMNRKFSEEAASWMQEQRASAYVKILS |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 1M5Y.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -21354 for 841 contacts (-25.4/contact) +
2D Compatibility (PS) -13955 + (NN) -6416 + (LL) 13256
1D Compatibility (HY) -5200 + (ID) 2250
Total energy: -35919.0 ( -42.71 by residue)
QMean score : 0.524
|
|
|