Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MEKLVIGSRGSELALWQANHIKERLKKE-CSMESEIRIVKTTGDKILDAPLNKIGGKGLFTKELEELLLKGAIDLAVHSLKDVPVVFEKGLDLACITKRADVRDTFLSVKFPDLMSLPKGAKVGTTSLRRSMQIKFKRKDLDTESLRGNVQTRLKKLECGEFDAIILAEAGLCRLNVQGAKYRKAFSVKEMIPSMGQGALGVEMLKN-HKHFITLQKLNNEESAFCCHLEREFIKGLNGGCQIPIGVHANLM-GDEVKIRAVLGLPNGKEVIAKEKQGDKTKAFDLVQELLEEFLQSGAKEILEKAQLF |
| 4MLV Chain:A ((3-307)) | MRKIIVGSRRSKLALTQTKWVIEQLKKQGLPFEFEIKEMV---------------------KEIEQAMLDKEIDMAVHSMKDMPAVLPEGLTIGCIPLREDHRDALISKNGERFEELPSGAVIGTSSLRRGAQLLSMRSDIEIKWIRGNIDTRLEKLKNEDYDAIILAAAGLSRMGWSKDTVTQYLEPEISVPAVGQGALAIECRENDHELLSLLQALNHDETARAVRAERVFLKEMEGGCQVPIAGYGRILDGGNIELTSLVASPDGKTIYKEHITGKDPIAIG--SEAAERLTSQGAKLLIDRVKEE |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 4MLV.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -97708 for 2374 contacts (-41.2/contact) +
2D Compatibility (PS) -30417 + (NN) -13323 + (LL) 868
1D Compatibility (HY) -20000 + (ID) 5350
Total energy: -165930.0 ( -69.89 by residue)
QMean score : 0.443
|
|
|