Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MRDYSELEIFEGNPLDKWNDIIFHASKKLSKKELERLLELLALLETFIEKEDLEERFESFAKALRMDEELQQKIESRKTDIVIQSMANILSGNE
4OCV Chain:A ((162-187))
------------------------------------------LTETIAHFHDTPHRFEDFKKALAADELGRAAGCGPEIEFYLSHADQYAVVMD
General information:
TITO was launched using:
RESULT:
Template:
4OCV.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 5419 for 96 contacts (56.4/contact) +
2D Compatibility (PS) -2795 + (NN) -1472 + (LL) 3432
1D Compatibility (HY) -400 + (ID) 650
Total energy: 3534.0 ( 36.81 by residue)
QMean score : 0.250
(partial model without unconserved sides chains):
PDB file :
Tito_4OCV.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4OCV-query.scw
PDB file :
Tito_Scwrl_4OCV.pdb
: