Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MAKEILVAYGVDIDAVAGWLGSYGGEDSPDDISRGLFAGEVGIPRLLKLFKKYHLPATWFAPGHSIETFPEPMKMIVDAGHEVGAHGYSHENPIAMTAKQEEDVLLKSVELIKDLTGKAPTGYVAPWWEFSNITNELLL---KHGFKYDHSLMHNDFTPYFVRVGDSWSKIDYSLEAKDWMKPLIRGVETNLVEIPANWYLDDLPPMMFIKKSPNSFGFVSPRDIGQMWIDQFDWVYREMDYA--VFSMTIHPDVSARPQVLLMHEKIIEHINQHEGVRWVTFNEIADDFLKRNPRKK |
1Z7A Chain:A ((77-302)) | ------------------------------------YGSRAGVWRLLKLFKRRNVPLTVFAVAMAAQRNPEVIRAMVADGHEICSHGYRWIDYQYMDEAQEREHMLEAIRILTELTGQRPVG----WYTGRTGPNTRRLVMEEGGFLYD-SDTYDDDLPYW--------------------DPASTAEKPHLV-IP---YTLDTNDMRFTQVQ----GFNNGEQFFQYLKDAFDVLYEEGATAPKMLSIGLHCRLIGRPARMAALERFIQYAQSHDKVWFARREDIARHWHREHPFQ- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1Z7A.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -90061 for 1664 contacts (-54.1/contact) +
2D Compatibility (PS) -23572 + (NN) -10540 + (LL) 3584
1D Compatibility (HY) -8800 + (ID) 3500
Total energy: -132889.0 ( -79.86 by residue)
QMean score : 0.502
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