Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKVTFQVPSITCNHCVDKIEKFVGEIEGVSFIDASVEKKSVVVEFDTP--ATQDLIKEALLDAGQEVV
2QIF Chain:A ((5-67))
---TLQVEGMSCQHCVKAVETSVGELDGVSAVHVNLEAGKVDVSFDADKVSVKD-IADAIEDQGYDVA
General information:
TITO was launched using:
RESULT:
Template:
2QIF.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -48478 for 408 contacts (-118.8/contact) +
2D Compatibility (PS) -6497 + (NN) -2410 + (LL) 640
1D Compatibility (HY) -5600 + (ID) 1250
Total energy: -63595.0 ( -155.87 by residue)
QMean score : 0.848
(partial model without unconserved sides chains):
PDB file :
Tito_2QIF.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2QIF-query.scw
PDB file :
Tito_Scwrl_2QIF.pdb
: