Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MYFKILATSFSLFLNSWLKRSKLSSVPFLSKRQISKSVQAIKIDANNKAIKYPPSVDNTVHNRMLSGSLNFNTENTNPKKNPTTTEKWIKF
2IKB Chain:A ((141-155))
-------GTFTSFGKGWVRRVAQNLIHASA-------------------------------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
2IKB.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -346 for 58 contacts (-6.0/contact) +
2D Compatibility (PS) -1617 + (NN) -1113 + (LL) 3580
1D Compatibility (HY) -800 + (ID) 200
Total energy: -496.0 ( -8.55 by residue)
QMean score : 0.319
(partial model without unconserved sides chains):
PDB file :
Tito_2IKB.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2IKB-query.scw
PDB file :
Tito_Scwrl_2IKB.pdb
: