Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKNAFKAFALLIVFFSNALLAQDLKIAAAANLTRALKALVKEFQKEHPKDAINISFNSSGKLYAQIAQNAPFDLFISADIARPKKLYDEKIT-PFKEEVYAKGVLVLWSENLKMDSLEILKDPKI-----------KRIAMANPKLAPYGKASMEVLDRLKLTPSLKSKIIYGASISQAHQFIATKNAQIG--FGALSLIDKKDKNLSYFIIDKTLYNPIEQALIITKNGANNPLAKVFKDFLFSPKARAIFKEYGYIVD |
| 3GZG Chain:A ((29-250)) | ---------------------------AAASLKESMDEAATAYEKAT-GTPVRVSYAASSALARQIEQGAPADVFLSADLEWMDYLQQHGLVLPAQRHNLLGNTLVL----VAPASSKLRVDPRAPGAIAKALGENGRLAVGQTASVPAGSYAAAALRKLGQWDSVSNRLAESESVRAALMLVSRGEAPLGIVYGSDARADAKVRVVATFPDDS--HDAIVYPVAALKN-SNNPATAAFVSWLGSKPAKAIFARRGFSLK |
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General information:
TITO was launched using:
| RESULT:
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Template: 3GZG.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -100220 for 1829 contacts (-54.8/contact) +
2D Compatibility (PS) -22000 + (NN) -9099 + (LL) 3196
1D Compatibility (HY) -3600 + (ID) 2800
Total energy: -134523.0 ( -73.55 by residue)
QMean score : 0.549
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