Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MVFFHKKIILNFIYSLMVAFLFHLSYGVLLKADGMAKKQTLLVGERLVWDKLTLLGFLEKNHIPQKLYYNLSSQDKELSAEIQSNVTYYTLRDANNTLIQALIPISQDLQIHIYKKGEDYFLDFIPIVFTRKERTLLLSLQTSPYQDIVKATNDPLLANQLMNAYKKSVPFKRLVKNDKIAIVYTRDYRVGQAFGQPTIKMAMVSSRLHQYYLFSHSNGRYYDSKAQEVAGFLLETPVKYTRISSPFSYGRFHPVLKVKRPHYGVDYAAKHGSLIHSASDGRVGFIGVKAG---YGKVVEIHLNELR----LVYAHMSAFANGLKKGSFVKKGQIIGRVGSTGLSTGPHLHF----GVYKNSRPINPLGYIRTAKSKLHGKQREVFLEKAQYSKQKLEELFKTHSFEKNSFYLLEGF |
1QWY Chain:A ((176-289)) | --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------YGQYH----GGGAHYGVDYAMPENSPVYSLTDGTV----VQAGWSNYGGGNQVTIKEANSNNYQWYMHNNRLT--VSAGDKVKAGDQIAYSGSTGNSTAPHVHFQRMSGGIGNQYAVDPTSYLQ--------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1QWY.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -43067 for 697 contacts (-61.8/contact) +
2D Compatibility (PS) -10561 + (NN) -1274 + (LL) 23344
1D Compatibility (HY) -4000 + (ID) 2100
Total energy: -37658.0 ( -54.03 by residue)
QMean score : 0.425
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