Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MKQSLREQKLLKILENDVLTILDSFSNYLFELREELD--FIEEEMEGEITEQNLTALYDFSNFLEDHVNVFYENVLNIDDVKTEHLYSGLIDSLNANLHFVKSFLSNQDLDFRFFKEINDGQDPQKTLSRLIPLQSGKNDASSFKANNSFVSLVYVYAYFMLETIRQSYRILRLLEKPINNNISEDMQSDIENFFVQANFLEYYVQNKIYPTNHAYDFTHLIMDSIIPNWIQIDMSVEAKKKELFEKYFQNIDEVTNKMLDQENQNKNSD |
3S5T Chain:A ((71-133)) | ------------IGEKPAQVVKEYTEHYVKEYRTDLEPMYAEDEKNK-----SIGAWYSYYKGIESHVQLYYKNLLVYRINYNEYTGGAHGIYMTTFLNMDLINLRPLKLDDIFTGDYKEALTDLLWNQLMADKKVTTHEALEDMGYGSTGDIAPTENFYLDKDGITFYYNVYDITPYAMGPVEIKIPYEMMEHMLGSNPIIGEMKSK-------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3S5T.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -6376 for 213 contacts (-29.9/contact) +
2D Compatibility (PS) -5795 + (NN) 1591 + (LL) 5112
1D Compatibility (HY) -3600 + (ID) 800
Total energy: -9868.0 ( -46.33 by residue)
QMean score : 0.104
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