Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSLKRAKTKAQQIKELLLKHYPNQTTEL---RHKNPYELLVATILSAQCTDARVNQITP---KLFEKYPSVNDLALASLEEVKEIIQSVSYSNNKSKHLISMGAKVVKDFKGVIPSTQKELMSLDGVGQKTANVVLSVCFDANYIAVDTHVFRTTHRLGL-----SNANTPIKTEEELSDLFK-DNLSKLHHALILFGRYTCKAKNPLCDACFLKEFCVSKASFKA
3FSP Chain:A ((11-217))
-------FPAREFQRDLLDWFARERRDLPWRKDRDPYKVWVSEVMLQQT---RVETVIPYFEQFIDRFPTLEALADADEDEVLKAWEGLGY-YSRVRNLHAAVKEVKTRYGGKVPDDPDEFSRLKGVGPYTVGAVLSLAYGVPEPAVDGNVMRVLSRLFLVTDDIAKPSTRKRFEQIVREIMAYENPGAFNEALIELGALVCTPRRPSCLLCPVQAYCQAFAEGVA
General information:
TITO was launched using:
RESULT:
Template:
3FSP.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -111435 for 1500 contacts (-74.3/contact) +
2D Compatibility (PS) -20608 + (NN) -10054 + (LL) 820
1D Compatibility (HY) -13200 + (ID) 2550
Total energy: -157027.0 ( -104.68 by residue)
QMean score : 0.491
(partial model without unconserved sides chains):
PDB file :
Tito_3FSP.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3FSP-query.scw
PDB file :
Tito_Scwrl_3FSP.pdb
: