Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MIKSQKEYLERIEYLNTLSHHYYNLDEPIVSDAVYDELYQELKAYEEENPNRIQANSPTQKVGATATNEFSKNPHLMRMWSLDDVFNQNELRAWLQRILKVYPNASFVCSPKLDGVSLNLLYQHGKLISATTRGNGLEGELVTNNAKHIANIPHSIAYNGEIEIRGEVIISKEDFDALNKERLNANEPLFANPRNAASGSLRQLDSNITKKRKLQFIPWGVGKHSLHFLRFK-ECLDFIVSLGFSAIQYLSLNKNHQEIEENYHTLIREREGFFALLDGMVIVVDELDIQKELGYTQKSPKFACAYKFPALEKHTKIVGVINQVGRSGAITPVALLEPVEIAGAMVNRATLHNYSEIEKKNIMLNDRVVVIRSGDVIPKIIKPLESYRDGSQQKIMRPKVCPICSHELLCEEIFTYCQNLNCPARLKESLIHFASKDALNIQGLGDKVIEQLFEEKLIFNALDLYALKLEDLMRLDKFKIKKAQNLLDAIQKSKNPPLWRLINALGIEHIGKGASKTLAKYGLNVLEKSEAEFLEMEGFGVEMAHSLVNFYASNQEFIRSLFELLNPKSSDTAEEKQKSSSVFSDKTIVLTGTLSKPRQEYAQMLENLGAKIASSVSAKTDFLIAGENAGSKLALAQKHGVSVLNEEELLKRLKELD |
4CC5 Chain:A ((15-309)) | --------------LNQYSYEYYVEDNPSVPDSEYDKLLHELIKIEEEHPEYKTVDSPTVRVGGEAQASFNKVNHDTPMLSLGNAFNEDDLRKFDQRIREQIGNVEYMCELKIDGLAVSLKYVDGYFVQGLTRGDGTTGEDITENLKTIHAIPLKMKEPLNVEVRGEAYMPRRSFLRLNEEKEKNDEQLFANPRNAAAGSLRQLDSKLTAKRKLSVFIYSVNDFTDFNARSQSEALDELDKLGFTTNKNRARVNNIDGVLEYIEKWTSQRESLPYDIDGIVIKVNDLDQQDEMGFTQKSPRWAIAYKFP------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 4CC5.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -104039 for 2361 contacts (-44.1/contact) +
2D Compatibility (PS) -31170 + (NN) -8670 + (LL) 28048
1D Compatibility (HY) -15200 + (ID) 6050
Total energy: -137081.0 ( -58.06 by residue)
QMean score : 0.394
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