Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MDREQIIALQHQRFATKKYDPNRRISEKDWEVLVEVGRLAPSSIGLEPWKMLLLKNERMKEDLKPMAWGGLSSLEGASHFVIYLARKGVTYDSDYVKKVMHEVKKRDYDTHSRFAQIIKNFQENDIKLNSERSLFDWASKQTYIQMANMMMAAAMLGIDSCPIEGYDQEKVEAYLEEKGYLNTAEFGVSVMASFGYRNQEITPKTRWKTEVIYEVIE
3OF4 Chain:A ((7-193))
--------LQQWRYATADFS-GAHITDDVLDKLLNTTRLTASSYGLQPYCTLVIRNKGLREQLVNHSFGQ-QKVADSSALVIFAAKTGAV--ADIVDPYISELSQQRQLTNEE-AENTRNYFTQKLQAMSAATRKEWAVRQAYIGLGTFLLAAAELEVDSCPMEGIEHDAYDNILSLKDLGLSTVFACPV----GYRSEADTTQFQKKVRQPLSRFK
General information:
TITO was launched using:
RESULT:
Template:
3OF4.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -37727 for 1452 contacts (-26.0/contact) +
2D Compatibility (PS) -20657 + (NN) -9413 + (LL) 1648
1D Compatibility (HY) -13600 + (ID) 2700
Total energy: -82449.0 ( -56.78 by residue)
QMean score : 0.484
(partial model without unconserved sides chains):
PDB file :
Tito_3OF4.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3OF4-query.scw
PDB file :
Tito_Scwrl_3OF4.pdb
: