Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MEFCVLFGGASFEHEISIVSAIALKGVLKDRI--KYFIFLDENHYFYLIEESNMHSKYFAQIKEKKLPPLILTHNGLLKNSFLGAKIIELPLVINLVHGGDGEDGKLASLLEFYRIAFIGPRVEASVLSYNKYLTKLYAKDLGVKALDY--VLLNEKNRANALDLIGFNFPFIVKPSNAGSSLGVNVVKEEKELIYALDSAFEYSKEVLIEPFIQGVKEYNLAGCKIKKGFCFSYVEEPNK----QEFLDFKQKYL--DFSRTKAPKANLSNALEEQLKENFKKLYNDLFDGAIIRCDFFVIEN-EVYLNEINPIPGSLANYLFDDFKTTLENLAQSLPKTPKIQVKNSYLLQIQKNK |
| 3SE7 Chain:A ((4-311)) | MKIGIIFGGVSEEHDISVKSAREVATHLGTGVFEPFYLGITKSGAWQLCDGPGENWED-GNCRPAVLSPDRSVH-GLLVLEQGKYETIRLDLVLPVLHGKLGEDGAIQGLLELSGIPYVGCDIQSSALCMDKSLTYLVARSAGIATPNFWTVTADEKIPTDQL-----TYPVFVKPARSGSSFGVSKVAREEDLQGAVEAAREYDSKVLIEEAVIGTE----IGCAVMGNGPELITGEVDQITLS-----------GSDNSAVTVP-ADISTTSRSLVQDTAKAVYRALGCRGLSRVDLFLTEDGKVVLNEVNTFPGMTSYSRYPRMMTAAGLSRADVIDRLVSLALA---------- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 3SE7.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -123198 for 2295 contacts (-53.7/contact) +
2D Compatibility (PS) -31203 + (NN) -15259 + (LL) 2368
1D Compatibility (HY) -15200 + (ID) 4450
Total energy: -186942.0 ( -81.46 by residue)
QMean score : 0.442
|
|
|