Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKRLEVSNQAKLPTQFGEFCIQCFREKGSNGSKDHLVIFTPNFPQNPLVRLHSECLTGDALGSQKCDCGGALQMALERISKEGGLVIYL---RQEGRGIGLFNKVNAYALQDKGYDTIQANEMIGFKDDERDYSIAGEILEYYRIKKMRLLTNNPLKIAALEKYAEVTRESLIVCANEHNQGYLEVKKLKMGHLL |
| 1NHR Chain:A ((40-85)) | -----------------------------------------------------------------CSCG--MQLYLEGKVKDVNSVRYMTGEKMESRGVNVFSNTEITAIQPKEHQVTVKDLVSGEERVENYDKLIISPGAVPFELDIPGKDLDNIYLMRGRQWAIKLKQKTVDPEVNNVVVIGSGYIGIEAAEA |
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General information:
TITO was launched using:
| RESULT:
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Template: 1NHR.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -9364 for 163 contacts (-57.4/contact) +
2D Compatibility (PS) -4575 + (NN) -965 + (LL) 3360
1D Compatibility (HY) -2800 + (ID) 800
Total energy: -15144.0 ( -92.91 by residue)
QMean score : 0.009
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