Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MEQNIFSLLIQKKSYKKLETLLKLKKLKVFMPLSLQENLLFIFIKDSKLLFAFKDLWASKEFNQRFAKEISHFLNTQGHACGLDELDALEILGYVPKDSLEKANFYAPIKKQAQFYRPSALGLFHNPIKDARLHECFEKARALIHYQRSFFEE |
1PD3 Chain:A ((67-84)) | ----------------------------------------------------------------------------------------------------------------------------------EQLGQKFEEIRWLIEEVR----- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1PD3.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -565 for 62 contacts (-9.1/contact) +
2D Compatibility (PS) -2010 + (NN) -2215 + (LL) 10920
1D Compatibility (HY) -800 + (ID) 350
Total energy: 4980.0 ( 80.32 by residue)
QMean score : 0.534
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