Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MNKAEFIDLVKKAGKYNSKREAEEAINAFTLAVETALSKGESVELVGFGKFETAEQKGKEGKVPGSDKTYKTEDKRVPKFKPGKILKQKVEEGK
1P78 Chain:A ((1-89))
MNKGELVDAVAEKASV-TKKQADAVLTAALETIIEAVSSGDKVTLVGFGSFESRERKAREGRNPKTNEKMEIPATRVPAFSAGKLFREKVAPP-
General information:
TITO was launched using:
RESULT:
Template:
1P78.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 11812 for 472 contacts (25.0/contact) +
2D Compatibility (PS) -9479 + (NN) -312 + (LL) 24
1D Compatibility (HY) -6000 + (ID) 1650
Total energy: -5605.0 ( -11.88 by residue)
QMean score : 0.502
(partial model without unconserved sides chains):
PDB file :
Tito_1P78.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1P78-query.scw
PDB file :
Tito_Scwrl_1P78.pdb
: