Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MIVGLIGVVEKISALEAHIEVQGVVYGVQVSMRTAALLQTGQKARLKILQVIKEDAHLLYGFLEESEKILFERLLKINGVGGRIALAILSSFSPNEFENIIATKEVKRLQQVPGIGKK--------LADKIMVDLIGFFIQDENRPARNEVFLALESLGFKSAEINPVLKTL---KPHLSIEAAIKEALQQLRS
2ZTC Chain:A ((17-208))
MIASVRGEVLEVALDHVVIEAAGVGYRVNATPATLATLRQGTEARLITAMIVREDSMTLYGFPDGETRDLFLTLLSVSGVGPRLAMAALAVHDAPALRQVLADGNVAALTRVPGIGKRGAERMVLELRDKV-------------HAVRSPVVEALVGLGFAAKQAEEATDTVLAANHDATTSSALRSALSLLGK
General information:
TITO was launched using:
RESULT:
Template:
2ZTC.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -119968 for 1175 contacts (-102.1/contact) +
2D Compatibility (PS) -18055 + (NN) -2784 + (LL) 1068
1D Compatibility (HY) -8400 + (ID) 2900
Total energy: -151039.0 ( -128.54 by residue)
QMean score : 0.628
(partial model without unconserved sides chains):
PDB file :
Tito_2ZTC.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2ZTC-query.scw
PDB file :
Tito_Scwrl_2ZTC.pdb
: