Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MCGVLSLQARLSFENCSKPLDCSLFATT--CTPQNPIGSCMVSSQGGVCGVLSLQARLSFENCSKPLDCSLFATTCTPQNPIGSCMVSSQGGVRGVLSLQARLSFKNCFLVKSLKPSQLTLMLTGFLGGFSFLTTGFW
2HRB Chain:A ((108-161))
-------------------LKTNFFATRNMCNELLPI----MKPHGRVVNISSLQCLRAFENCSEDLQERFHSETLTEGDLVDLMKKFVEDTKNEVHEREGWPNSPYGVSKLGVTVLSRILARRLDEKRKADRILVNA
General information:
TITO was launched using:
RESULT:
Template:
2HRB.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -9644 for 201 contacts (-48.0/contact) +
2D Compatibility (PS) -5307 + (NN) -1322 + (LL) 1292
1D Compatibility (HY) -4000 + (ID) 1000
Total energy: -19981.0 ( -99.41 by residue)
QMean score : -0.163
(partial model without unconserved sides chains):
PDB file :
Tito_2HRB.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2HRB-query.scw
PDB file :
Tito_Scwrl_2HRB.pdb
: