Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MPSPVNPIHTNANALNSGAKNEVKDAKNAPKSASKDFSKILNQKISKDKTAPKESPNHSALKATPKDAKEDAKALEKTPTLPHQHAQNLAKDQQAPTLKDWLNHPKTHPTAPHEAQHETHEANETNPKTPNETLSKNEKKPNEVASNAHQTNLPNKNPITPNHANNAIKNPTTPTHNVKDPKTLKDIQTLSQKHDLNASNIQAATTPENKNPLNASDHLALKTTQASINHTLTKNDAKNTANLSSVLQSLEKKEPQNKEHANPPNNEKKTPPLKEALQMNAIKRDKTLSKKKPEKTPIHAKTQTIAPSATPENAPKIPLKTLPLMPLIGANPPPNDNAPTPLEKEEKTKEISDNKEKAKETNSSAQSVQNTQASDKTSDNKSTTPKETIRHFTQQLKQEIQEYKPPMSKISMDLFPKELGKVEVTIQKVGKNLKVSVISHNNSLQTFLDNQQDLKNSLNALGFEGVDLSFSQDSSKEQQAPKDQPKEPFKEQELTPLKENALKSYQENTDHENQETSMQITLYA |
4A0A Chain:B ((222-335)) | ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SSVDATVKLWDLRNIKDKNSYIAEMPHEKPVNAAYFNPTDSTK----LLTTDQRNEIRVYSSYDWSKPDQIIIH-------PHRQFQHLTPIKATWHPMYDLIVAGRYPDDQL---LLNDKRTIDIYDANSGGLVHQLRDPNAAGIISLNKFSPTGDVLASGMGFNILIWNRE------------------------------------------------------------------------------------------------------------------------------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 4A0A.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 78088 for 723 contacts (108.0/contact) +
2D Compatibility (PS) -11510 + (NN) -1746 + (LL) 16168
1D Compatibility (HY) -4400 + (ID) 1500
Total energy: 75100.0 ( 103.87 by residue)
QMean score : 0.125
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