Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MPFINIKLVPENGGPTNEQKQQLIEGVSDLMVKVLNKNKASIVVIIDEVDSNNYGLGGESIHHLRQKN
2OPA Chain:A ((1-60))
-PYVTVKMLE---GRTDEQKRNLVEKVTEAVKETTGASEEKIVVFIEEMRKDHYAVAGKRLSDME---
General information:
TITO was launched using:
RESULT:
Template:
2OPA.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -20884 for 322 contacts (-64.9/contact) +
2D Compatibility (PS) -7014 + (NN) -5453 + (LL) 344
1D Compatibility (HY) -6000 + (ID) 850
Total energy: -39857.0 ( -123.78 by residue)
QMean score : 0.636
(partial model without unconserved sides chains):
PDB file :
Tito_2OPA.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2OPA-query.scw
PDB file :
Tito_Scwrl_2OPA.pdb
: