Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MTNFEKIIAQNRLKTNAVLTTYCAIFAFIGLLVDAIRINANDLGIALFKLMTFQIFPTITIVMFVVAFVIILVCIQNFSSIMLSGDEYKLIDPSKVLSSKENQIHRLLLELLEEAKLHFEPKLYIINAPYMNAFASGWDESNSLIALTSALIERLDRD---ELKAVIAHELSHIRHNDIRLTMCVGILSNIMLLVANFSVYFFMGNRKNSGANL----ARMILWVLQI-ILPFLTLLLQMYLSRTREYMADSGAAFLMHDNKPMIRALQKISNDYTNNDYKEIDKNSTRSAAYLFNAEMFSTHPSIKNRIQSLRKRVI |
3QF4 Chain:B ((95-204)) | -----------------------------------------------------------------------------------------------------------------------------------------WLQGKIMLTLSQDVVFRLRKELFEKLQRVPVGFFDRTPHGDI-ISRVINDVDNINNVLGNSIIQFFSGIVTLAGAVIMMFRVNVILSLVTLSIVPLTVLITQIVSSQTRKYFYENQRVLGQLNGIIEEDISGLTVIKLFTREEKEMEKFDRVNESLRKVGTKAQIFSGVLPPLMNMVNNLG |
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General information:
TITO was launched using:
| RESULT:
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Template: 3QF4.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -31014 for 454 contacts (-68.3/contact) +
2D Compatibility (PS) -10430 + (NN) -2630 + (LL) 13180
1D Compatibility (HY) -9200 + (ID) 1350
Total energy: -41444.0 ( -91.29 by residue)
QMean score : 0.112
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