Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MLKRASFVEVNTHSLRHNFNAVKNIVPKDACVMAVVKANAYGAGAIKASEIFLQEGANYLGVATLDEALELRSHFSQTPILILGYSPNTNASMLIDNDLSAMVFSLEQAEVFSQMALKSQKRLKVHLKIDTGMHRLGLEPTFKSIETIKKIRAL----KGLEVEGIFTHLSNADSNIKTHAKNQMKVFNAFLEQLLDQKIEFQYRHAYNSAGILSLCNGNENRLLNLYRPGIMLYGFYPSNEMKESSQTILKNVISLKARIVQIKRVKKGEFIGYGEHFYTNEETLVGVLALGYADGLVRALGNRIQVAINNQLAPLIGKVCMDQCFVKLNDIEAKEGDEVILFGDKSTKANDASEIATLLNTIPYETISTLSKRLERVYV |
| 1SFT Chain:A ((4-368)) | -FHRDTWAEVDLDAIYDNVENLRRLLPDDTHIMAVVKANAYGHGDVQVARTALEAGASRLAVAFLDEALALREKGIEAPILVLGASRPADAALAAQQRIALTVFRSDWLEEASAL-YSGPFPIHFHLKMDTGMGRLGV----KDEEETKRIVALIERHPHFVLEGLYTHFATADEVNTDYFSYQYTRFLHMLEWLPSRP---PLVHCANSAASLRF----PDRTFNMVRFGIAMYGLAPSPGIKPLLPYPLKEAFSLHSRLVHVKKLQPGEKVSYGATYTAQTEEWIGTIPIGYADGWLRRL-QHFHVLVDGQKAPIVGRICMDQCMIRLPG-PLPVGTKVTLIGRQGDEVISIDDVARHLETINYEVPCTISYRVPRIFF |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 1SFT.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -220796 for 3034 contacts (-72.8/contact) +
2D Compatibility (PS) -38289 + (NN) -3918 + (LL) 696
1D Compatibility (HY) -27600 + (ID) 6400
Total energy: -296307.0 ( -97.66 by residue)
QMean score : 0.550
|
|
|