Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MKHLAPLIHIPFKALWLGTALSMFLSLNLNAEENPTKTEPKPAKGVKNKPKSPVTNVMMTNCDNLKDFNAKQKEVLKAAYQFGSKENLGYEMAGIAWKESCAGTYKINFSDPSAGIYHAYIPSVLKSYGHNNSPFLRNVMGELLIKDDAFASEVALKELLYWKTRYHDNLKDMIKSYNKGSRWEKNEKANADAEKYYEEIQDRIRRLKESKIFDSQSSNDQELQKSANSNLDLDPIGNAMPQTLAQTETQKSQIEKSQIE-EAQTQKSQEMKEAASEQ-----AIKKPLEKEKDKPMYLAQINSADFAPAKKSPKKPAKASPKRSSKNNISVKSNTKTASKNKEVCKNCSPGQRNAILANHITLMQEL |
3DTP Chain:A ((830-957)) | ------------------------------------------------------------------------------------------------------------------------------------------------------AAYLKLRNWQWW--RLFTKVKPLLQSAEREKEMASMKEEFTRLKEALEKSEARRKELEEKMVSLLQEKNDLQLQVQAEQD------------NLADAEERCDQLIKNKIQLEAKVKEMNERLEDEEEMNAELTAKKRKLEDECSELKRDIDDLELTL------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3DTP.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 27920 for 471 contacts (59.3/contact) +
2D Compatibility (PS) -13156 + (NN) -244 + (LL) 11012
1D Compatibility (HY) -4000 + (ID) 1600
Total energy: 19932.0 ( 42.32 by residue)
QMean score : 0.398
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