Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MAFMRKSYRAVSVDSVTIKSIKAKLGKNHYHKVSGSHQVGGAHKVISSFNTKNPFFIRQHLKSH
2PN6 Chain:A ((58-78))
---------SLNLDYIVITSVKAKYGKNYHVELGNKLAQIPGVWGVYFVLGDNDFIVMARYKTR
General information:
TITO was launched using:
RESULT:
Template:
2PN6.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -336 for 48 contacts (-7.0/contact) +
2D Compatibility (PS) -2301 + (NN) 820 + (LL) 1020
1D Compatibility (HY) -2000 + (ID) 450
Total energy: -3247.0 ( -67.65 by residue)
QMean score : 0.219
(partial model without unconserved sides chains):
PDB file :
Tito_2PN6.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2PN6-query.scw
PDB file :
Tito_Scwrl_2PN6.pdb
: