Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MAKTETDNFNKQDKHKLDYRKINYESKEIDDGKFIRIGDEVNHIFIEKAKINRGYLQNPKHKRTWWSLWLYKKPSDDALDIKVLDVFDDGKYTYFRYDRDQAFSKFPYTYKVVDGYDNPINSRVVGNYIIAEDISKKWTLRSGKEYVCVRRDKRKYQKSRDFMRLKRLLEQDEAMKAKRNNMHLIEDTTPQPKNAISVTELLAQIKNQTPSKECRALNEEEVKTLEEVKNIIKTPKPLQKDLKKNAKKHTIKTQYCVPIPYIERLKTTDGLEKHQKGLNNTKKQIQANPIEEIKENKK |
2KJ1 Chain:A ((77-103)) | ------------------------------------------------------------------------------------------------------------------------NMEVLSDHIVIEGLSAEEIIKMGETVL------------------------------------------------------------------------------------------------------------------------------------------------------- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 2KJ1.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) 572 for 109 contacts (5.2/contact) +
2D Compatibility (PS) -2500 + (NN) 1196 + (LL) 17508
1D Compatibility (HY) -2400 + (ID) 300
Total energy: 14076.0 ( 129.14 by residue)
QMean score : -0.128
|
|
|