Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MGFQNENKLKVGASVKATI--NDKVVEAKVISIGF--NRVTLRSEKGQRSHLRFQ
2D9T Chain:A ((8-44))
------KVWKPGDECFALYWEDNKFYRAEVEALHSSGMTAVVKFTDYGNYEEVLL
General information:
TITO was launched using:
RESULT:
Template:
2D9T.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -12989 for 152 contacts (-85.5/contact) +
2D Compatibility (PS) -3282 + (NN) 2797 + (LL) 312
1D Compatibility (HY) -1600 + (ID) 300
Total energy: -15062.0 ( -99.09 by residue)
QMean score : 0.713
(partial model without unconserved sides chains):
PDB file :
Tito_2D9T.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2D9T-query.scw
PDB file :
Tito_Scwrl_2D9T.pdb
: