Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MEIKMAKDYGFCFGVKRAIQIAEKNQNSL-IFGS-------LIHNAKEINRLEKNFNVKIEEDPKKIPKNKSVIIRTHGIPKQDLEYLKNKGVKITDATCPYVIKPQQIVESMSKEGYQIVLFGDINHPEVKGVISYATNQ---ALVVNSLEELQE--KKLQRKVALVSQTTKQTPKLLQIASYLVERCTEV--RIFNTICNATSYNQKAALDLSKEVDIMIVVGGKTSSNTKQLLSIAKQHCKDSYLVEDENELELAWFKDKKLCGITAGASTPDWIIENVKQKISTI |
| 4EB3 Chain:A ((13-294)) | MQILLANPRGFCAGVDRAISIVE---NALAIYGAPIYVRHEVVHNRYVVDSLRERGAIFIEQ-ISEVPDGAILIFSAHGVSQAVRNEAKSRDLTVFDATCPLVTKVHMEVARASRRGEESILIGHAGHPEVEGTMGQYSNPEGGMYLVESPDDVWKLTVKNEEKLSFMTQTTLSVDDTSDVIDALRKRFPKIVGPRKDDICYATTNRQEAVRALAEQAEVVLVVGSKNSSNSNRLAELAQRMGKRAFLIDDAKDIQEEWVKEVKCVGVTAGASAPDILVQNVVARLQQL |
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General information:
TITO was launched using:
| RESULT:
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Template: 4EB3.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -91291 for 2203 contacts (-41.4/contact) +
2D Compatibility (PS) -28724 + (NN) -6746 + (LL) 28
1D Compatibility (HY) -16000 + (ID) 4300
Total energy: -147033.0 ( -66.74 by residue)
QMean score : 0.480
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