Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MKDTLFNESLNKRFCFDEKVAHVFDDMLERSIPYYHEMLNLGAYFIAQNLKENVYHKSLPKPLIYDLGCSTGNFFIALNQQIQQDIELVGIDNSMPMLKKAQEKLKDFNNVRFECMDFLEVKFKEASAFSLLF---VLQFVRPMQREVLLKKIYNSLALNGVLLVGEKIMSEDRILDKQMIELYYLYKQNQGYSHNEIAFKREALENVLVPYSLKENIALLESVGFKHVEALFKWVNFTLLVARKT |
2P35 Chain:A ((38-130)) | ----------------------------------------------------------------YDLGCGPGNSTELLTDRYGVNV-ITGIDSDDDMLEKAADRLP---NTNFGKADL--ATWKPAQKADLLYANAVFQWV--PDHLAVLSQLMDQLESGGVLAVQMPDNLQEPTHIAMHETADGGPWKDAFKPLPPPSDYFNALSPKSSRVDVWHTVYNHPMKDADSIVEWVKGTGLRPYLAAAG |
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General information:
TITO was launched using:
| RESULT:
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Template: 2P35.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -82193 for 647 contacts (-127.0/contact) +
2D Compatibility (PS) -9402 + (NN) -1115 + (LL) 5084
1D Compatibility (HY) -6000 + (ID) 1600
Total energy: -95226.0 ( -147.18 by residue)
QMean score : 0.487
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