Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MQDKIIEILQISPIVPVVVVENIKDAVPLAQSLIEGGIPIIEVTLRSNCALEAIELIAKNVPKMRVGAGTILNLTQLEQAQNRGAEFLISPGLTIKLLEHAKKKDMPLIPGVSSSSEVMQALELGYNALKFFPAEYCGGVKLLNAFNGPFKGVKFCPTGGISADNMRSYLALENVVCVGGSWLTPKDLIQNKEWDKITEICKRALALR
1FWR Chain:A ((26-208))
----------------------LEHAVPMAKALVAGGVRVLEVTLRTECAVDAIRAIAKEVPEAIVGAGTVLNPQQLAEVTEAGAQFAISPGLTEPLLKAATEGTIPLIPGISTVSELMLGMDYGLKEFQFFPAEANGGVKALQAIAGPFSQVRFCPKGGISPANYRDYLALKSVLCIGGSWLVPADALEAGDYDRITKLAREAVEGA
General information:
TITO was launched using:
RESULT:
Template:
1FWR.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -129691 for 1447 contacts (-89.6/contact) +
2D Compatibility (PS) -20522 + (NN) -15444 + (LL) 2412
1D Compatibility (HY) -19600 + (ID) 4650
Total energy: -187495.0 ( -129.57 by residue)
QMean score : 0.606
(partial model without unconserved sides chains):
PDB file :
Tito_1FWR.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1FWR-query.scw
PDB file :
Tito_Scwrl_1FWR.pdb
: