Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MNNHTSSFGSFIAKNGFLNEKEVAQKFNDYIHDRDAQIWLMIMGYDLNKIEYVKANVLSGYKADVNVIIQIKMKQTLDSENLQVKLVSNLKGFNQIDKRKLRSYQEMWNIPPNIYQLFAYFTGELKPTRQDIKYPNKRMLAYEFTNKEQQELLAWLNDNKMLIVSDILKGRGEFSAEWVLVIQKINLNMKWALKNINEVMQHYLDDGIVEISKKGSLKIGRITIQRKGGDNGRESANMLQFKIDPTGLLG |
| 2FKC Chain:B ((6-245)) | -------LGSKTAKDGFKNEKDIADRFENWKENSEAQDWLVTMGHNLDEIKSVKAVVLSGYKSDINVQVLVFYKDALDIHNIQVKLVSNKRGFNQIDKHWLAHYQEMWKFDDNLLRILRHFTGELPPYHSNTK-DKRRMFMTEFSQEEQNIVLNWLEKNRVLVLTDILRGRGDFAAEWVLVAQKVSNNARWILRNINEVLQHY-GSGDISLSPRGSINFGRVTIQRKGGDNGRETANMLQFKIDPTELFD |
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General information:
TITO was launched using:
| RESULT:
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Template: 2FKC.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -73693 for 1789 contacts (-41.2/contact) +
2D Compatibility (PS) -26002 + (NN) -5973 + (LL) 356
1D Compatibility (HY) -23200 + (ID) 6500
Total energy: -135012.0 ( -75.47 by residue)
QMean score : 0.410
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