Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MNISVNPYLMAVVFVVFVLLLWAMNVWVYRPLLAFMDNRQAEIKDSLAKIKTDNTQSVEIGHQIETLLKEAAEKRREMLA--EAIQKATESYDAVIKQKENELNQEFEAFAKQLQNEKQILKEQLQAQMTVFEDELNKRVAMGLGS |
3J04 Chain:A ((827-909)) | -------------------------------------------RNCAAYLKLRNWQWWRLFTKVKPLL-QVTRQEEEMQAKDEELQRTKER-----QQKAEAELKELEQKHTQLCEEKNLLQEKLQAETELYA------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3J04.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 18885 for 332 contacts (56.9/contact) +
2D Compatibility (PS) -9484 + (NN) -8893 + (LL) 6408
1D Compatibility (HY) -4000 + (ID) 1250
Total energy: 1666.0 ( 5.02 by residue)
QMean score : 0.487
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