Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MIDQLQIVPKAQVLKNNTMERSLALALQKVSIPRSTSAHRTLLINHFLEQVILQNIKT----------IAFRGIIKLTPHNENPLLK-PYSAFITLNSIIRACAYCPL
3UEM Chain:A ((220-283))
------------------------------------------RITEFCHRFLEGKIKPHLMSQELPEDWDKQPVKVLVGKNFEDVAFDEKKNVFVEF-YAPWCGHCKQ
General information:
TITO was launched using:
RESULT:
Template:
3UEM.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -14123 for 205 contacts (-68.9/contact) +
2D Compatibility (PS) -5763 + (NN) -3089 + (LL) 3856
1D Compatibility (HY) -2400 + (ID) 400
Total energy: -21919.0 ( -106.92 by residue)
QMean score : 0.119
(partial model without unconserved sides chains):
PDB file :
Tito_3UEM.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3UEM-query.scw
PDB file :
Tito_Scwrl_3UEM.pdb
: