Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MDQEILDVLIVGAGPGGIATVVECEIAGVKK--VLLCEKTESHSGMLEKFYKAGKRIDKDYKKQVVELKGHIPFKDSFKEETLENFTNLLKEHRITPSYKTDIESVKKEGE-LFKITTTSNTTYHAKFVVVAIGKMGQPNRPTTYKIPVALSKQVVFSINDCKE--NEKTLVIGGGNSAVEYAIALCKTTP-TTLNYRKKEFSRINEDNAKNLQE----VLDNNTLKSKLGVD------IESLEEDNTQIKVNFTDNTSESFDRLLYAIGGSTPLEFFKRCSLELDPSTNIPVVKENLESNNIPNLFIVGDILFKSGASIATALNHGYDVAIEIAKRLQS |
| 3LZW Chain:A ((4-286)) | -DTKVYDITIIGGGPVGLFTAF---YGGMRQASVKIIESLPQLGGQLSALYP---------EKYIYDVAG---FPKIRAQELINNLKEQMAKFDQTICLEQAVESVEKQADGVFKLVTNEETHYSKTVIITAGNGAFKPRKLELENAEQYEGKNLHYFVDDLQKFAGRRVAILGGGDSAVDWALMLEPIAKEVSIIHRRDKF-RAHEHSVENLHASKVNVLTPFVPAELIGEDKIEQLVLEEVKGDRKEIL---------EIDDLIVNYGFVSSLGPIKNWGLDIE--KNSIVVKSTMET-NIEGFFAAGDICTYEGKVNLIASGFGEAPTAVNNAKAYM |
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General information:
TITO was launched using:
| RESULT:
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Template: 3LZW.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -122047 for 2063 contacts (-59.2/contact) +
2D Compatibility (PS) -27747 + (NN) 136 + (LL) 916
1D Compatibility (HY) -17200 + (ID) 3550
Total energy: -169492.0 ( -82.16 by residue)
QMean score : 0.332
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