Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKTNGLFKMWGLFLVLIALVFNACSDSHKEKKDALEVIKQRGVLKVGVFSDKPPFGSVD-SKGNYQGYDVVIAKRMALDLLGDENKIEFIPVEASARVEFLKANKVDIIMANFTRTKEREKVVDFANPYMKVALG-VISKDGVIKNIEELKDKELIVNKGTTADFYFTKNYPNIKL-LKFEQ--NTETFLALLNNKAI-ALAHDNTLLLAWVKQHPEF--------KLGITSLGDKDVIAPAIKKGNPKLLEWLNNEIDSLISSDFLKEAYQETLEPIYGDGIKPEEIIFE |
| 2V25 Chain:A ((31-253)) | ----------------------------------LESIKSKGQLIVGVKNDVPHYALLDQATGEIKGFEVDVAKLLAKSILGDDKKIKLVAVNAKTRGPLLDNGSVDAVIATFTITPERKRIYNFSEPYYQDAIGLLVLKEKKYKSLADMKGANIGVAQAATTKKAIGEAAKKIGIDVKFSEFPDYPSIKAALDAKRVDAFSVDKSILLGYVDDKSEILPDSFEPQSYGIVTKKDD----PAFAKYVDDFVKEHKNEIDALAKKWGL------------------------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 2V25.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -103903 for 1652 contacts (-62.9/contact) +
2D Compatibility (PS) -22729 + (NN) -10513 + (LL) 4400
1D Compatibility (HY) -16400 + (ID) 3400
Total energy: -152545.0 ( -92.34 by residue)
QMean score : 0.500
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