Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MQKRVVILLLDSFGIGASEDAKDFGDLGANTLGNIAKACFNNLADSNDRNGVLKLPNLEGLGLG-LSALKAAN--ELPLGFQLKPNLIGAYAYAKELSSAKDTISGHWEMMGAPVLFEWGYFKDKNDSFPKEILDEIMHKTKIKGYLGNCHASGTEIIKDLGEKHLETLYPIFYTSADSVFQIAAHEERFGLDHLYALCEEAFQIL--EPLKIARVIARPFIGTNRENFKRTANRKDYAIKPHKKLLFETFIEEKQGEVISIGKIADIYAHVGITQKFKAGSLMELCDVTLDQVKNAPNNSLIFTNFVHFDSDYGHRRDVSGYANALEYFDARLKEVLDNLRENDLLILCADHGCDPSFKGTDHTREYIPVLFYHKDLQPAF--LGKSETFADIGQSIAYFLGLSPLDYGKNLLNFKGQP |
3TWZ Chain:A ((10-395)) | --KRIFLVVMDSVGIGEAPDAEQFGDLGSDTIGHIAEHM----------NG-LQMPNMVKLGLGNIREMKGISKVEKPLGY---------YTKMQEKSTGKDTMTGHWEIMGLYIDTPFQVFPE---GFPKELLDELEEKTGRK-IIGNKPASGTEILDELGQEQMETGSLIVYTSADSVLQIAAHEEVVPLDELYKICKIARELTLDEKYMVGRVIARPFVG-EPGNFTRTPNRHDYALKPFGRTVMNE-LKDSDYDVIAIGKISDIYDGEGVTESLRTKSNMDGMDKLVDTL-NMDFTGLSFLNLVDFDALFGHRRDPQGYGEALQEYDARLPEVFAKLKEDDLLLITADHGNDPIHPGTDHTREYVPLLAYSPSMKEGGQELPLRQTFADIGATVAENFGVKMPEYGTSFLNELK-- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 3TWZ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -300749 for 3510 contacts (-85.7/contact) +
2D Compatibility (PS) -40418 + (NN) -12010 + (LL) 1324
1D Compatibility (HY) -32800 + (ID) 9000
Total energy: -393653.0 ( -112.15 by residue)
QMean score : 0.548
|
|
|