Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MLEDYAISLEEVNFNDFIVVDVRELDEYE-ELHLPNATLIS-------VNDQEKLADFLSQHKDQKVLLHCRAGRRALDAAKSMHELGYTPY-YLEGNVYDFEKYGFRMVYDDTSLSDKKN
2HHG Chain:A ((29-128))
-----AIALHKSGASDVVIVDIRDPREIERDGKIPGSFSCTRGMLEFWIDPQSPYAKPIFQE-DKKFVFYCAGGLRSALAAKTAQDMGLKPVAHIEGGFGAWRDAGGPIE-----------
General information:
TITO was launched using:
RESULT:
Template:
2HHG.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -44569 for 610 contacts (-73.1/contact) +
2D Compatibility (PS) -10247 + (NN) -3827 + (LL) 1312
1D Compatibility (HY) -4800 + (ID) 1300
Total energy: -63431.0 ( -103.99 by residue)
QMean score : 0.516
(partial model without unconserved sides chains):
PDB file :
Tito_2HHG.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2HHG-query.scw
PDB file :
Tito_Scwrl_2HHG.pdb
: