Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MREIVWVHSQRIAPYKTLILNELHYYPLE----SDLTPFNALIFTSKNAVFSLLETLNNSPKLKMLQNIPAYALSEPTAKTLQDHHFKTAFIGKKAHGKEFAKEILPL-LEKKSVLYLRAKEIASSLDTILLEHGINLQQAVVYENKLKHLTLSEQ-NALKPQEKSVLIFTAISHAKAFLHYFEF-----LKSYTAISIGNTTAHYLQEQGIQS-YTAQKPSLESCLELALNLKS
3MW8 Chain:A ((25-239))
------------IPYLVEPLLSVEAAAVTQAQLDELSRADILIFISTSAVSFATPWLKD-----QWPKATYYAVGDATADALALQGITAERSP--QATEGLLTLPSLEQVSGKQIVIVRGKGGREAMADGLRLRGANVSYLEVYQRACPPLDAPASVSRWQSFGIDTIVVTSGEVLENLINLVPKDSFAWLRDCHIIVPSARVETQARKKGLRRVTNAGAANQAAVLDALGM---
General information:
TITO was launched using:
RESULT:
Template:
3MW8.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -123051 for 1469 contacts (-83.8/contact) +
2D Compatibility (PS) -20667 + (NN) 3727 + (LL) 2020
1D Compatibility (HY) -4400 + (ID) 1550
Total energy: -143921.0 ( -97.97 by residue)
QMean score : 0.485
(partial model without unconserved sides chains):
PDB file :
Tito_3MW8.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3MW8-query.scw
PDB file :
Tito_Scwrl_3MW8.pdb
: