Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKNFYDWIKEFVRDQGEFIAQQSGWLELERSSYAKLIAQTISHVLNGGSLLVSADSSRRWFLNYILSNLNPKDLKERPLLSVIDFNASSFYPKNDANLSLATIELTYQNPMFWHVGRVENEGLKTLLLSKIPSFLWLFEELKEDCLLLKEHDSLLDYKLLQLFKLFENALFSALYNKVAL |
| 2O8B Chain:A ((26-98)) | -------------------------------------------------------------------------MPEKPTTTVRLFDRGDFYTAHGEDALLAAREVFKTQGVIKYMGPAGAKNLQSVVLSKMN-----FESFVKDLLLVRQYRVEVYKNRAGSKENDWYLAYKASPGNLSQ |
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General information:
TITO was launched using:
| RESULT:
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Template: 2O8B.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -6007 for 453 contacts (-13.3/contact) +
2D Compatibility (PS) -7631 + (NN) -2033 + (LL) 5712
1D Compatibility (HY) -5200 + (ID) 950
Total energy: -16109.0 ( -35.56 by residue)
QMean score : 0.172
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