Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MDIKACYQNAQALLEGHFLLSSGFHSNYYLQSAKVLEDPKLAEQLALELAKQIQEAHLNIECVCSPAIGGILAGYELARALGVRFIF--TERVDNTMTLRRGFEVKKNEKILVCEDIITTGKSAMECAKVLEEKGAQIVAFGALANRGICKRAHSHLKAQEGACLPSHLPLFALEDFVFDMHKPSSCPLCATSVAIKPGSRGN
2AEE Chain:A ((14-153))
LDIKAVYLKP----EDPFTWASGIKSPIYTDNRVTLSYPKTRDLIENGFVETIKAHFPEVEVIAGTATAGIPHGAIIADKMTLPFAYIRSKPK----GNQIEGRVLKGQKMVIIEDLISTGGSVLDAAAAASREGADVLGVVAIFTYELPKASQNFKEAGIKLITLSNYTELIAVAKLQGYITNDGLHLLKKFKEDQVNWQ--
General information:
TITO was launched using:
RESULT:
Template:
2AEE.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -87922 for 961 contacts (-91.5/contact) +
2D Compatibility (PS) -15112 + (NN) -6804 + (LL) 784
1D Compatibility (HY) -6800 + (ID) 1750
Total energy: -117604.0 ( -122.38 by residue)
QMean score : 0.496
(partial model without unconserved sides chains):
PDB file :
Tito_2AEE.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2AEE-query.scw
PDB file :
Tito_Scwrl_2AEE.pdb
: