Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKSNKKSNHLRAIYRALVIAIGLAVIIVFNYFNRKNNNARSSRRACSCFFSLTGVNLEKIGSFDTGAKLIVLNHQSLLDIIYLEAYHPSNICWIAKKELGEIPFYGHALTDTGMILIDREDKKGIVSLLKACKEKLDQNRPLVIFPEGTRGKGGEKFLPFKQGAKIIAEKFQLKIQPMVLINSIKIFNSKPLEAYKARTRLVMLESYTPDFSSPTWYEELQERMQKEYLKHYHELNA |
| 3LIB Chain:A ((179-214)) | --------------------------------------------------------VSKVRTFDTGYAFMVSNSGVILS-------HPTHKDWIGKKDLYDFGGEELEKASRDIKNGIGGHLETADPTTGKTVILFYEPVETGDFAFVLVVPKEEMLAGVADLRE------------------------------------------------------------------------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 3LIB.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -6244 for 179 contacts (-34.9/contact) +
2D Compatibility (PS) -3673 + (NN) -312 + (LL) 9324
1D Compatibility (HY) -3200 + (ID) 750
Total energy: -4855.0 ( -27.12 by residue)
QMean score : 0.091
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