Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MQKKIFLLEDDYLLSESIKEFLEHLGYEVFCAFNGKEAHERLSVERFNLLLLDVQVPEMNSLELFKRIKNDFLISTPVIFITALQDNATLKNAFNLGASDYLKKPFDLDELEARIKRFFNDDPIEIMPNIFYHQHALNVKGKKEILAPKTAQLLEYFLEHKGQIISSQALENNLWEQAIDDSTLRTYIKVLRKLLGKNCIETHKGVGYRFNPL
1NXV Chain:A ((2-113))
--KKILIVDDEKPISDIIKFNMTKEGYEVVTAFNGREALEQFEAEQPDIIILDLMLPEIDGLEVAKTIRKTS--SVPILMLSAKDSEFDKVIGLELGADDYVTKPFSNRELQARVKALLRRS-------------------------------------------------------------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
1NXV.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -94569 for 886 contacts (-106.7/contact) +
2D Compatibility (PS) -12287 + (NN) -6649 + (LL) 7440
1D Compatibility (HY) -8400 + (ID) 2150
Total energy: -116615.0 ( -131.62 by residue)
QMean score : 0.723
(partial model without unconserved sides chains):
PDB file :
Tito_1NXV.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1NXV-query.scw
PDB file :
Tito_Scwrl_1NXV.pdb
: