Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MKNQVKKILGMSVVAAMVIVGCSHAPKSGISKSNKAYKEATKGAPDWVVGDLEKVAKYEKYSGVFLGRAEDLITNNDVDYSTNQATAKARANLAANLKSTLQKDLENEKTRTVDASGKRS-ISGTDTEKISQLVDKELIASKMLARYVGKDRVFVLVGLDKQIVDKVREELGMVKK |
1DZK Chain:A ((79-153)) | ----------------------------------------------------------------------------DVNYAGNNKFVVSYASETALIISNINVDEEGDKTIMTGLLGKGTDIEDQDLEKFKEVTRENGIPEENIVNIIERDDCPA--------------------- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 1DZK.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) 18809 for 423 contacts (44.5/contact) +
2D Compatibility (PS) -7044 + (NN) 5731 + (LL) 6916
1D Compatibility (HY) -2000 + (ID) 950
Total energy: 21462.0 ( 50.74 by residue)
QMean score : 0.129
|
|
|